Returns the genome reference nucleotide at the specified chromosome and position.

Source: R/variantkey.R

Returns the genome reference nucleotide at the specified chromosome and position.

GetGenorefSeq(chrom, pos, mf = vk.env$genoref_$MF)

Arguments

chrom

Encoded Chromosome number (see encode_chrom).
pos

Position. The reference position, with the first base having position 0.
mf

Memory-mapped file object as retured by MmapGenorefFile.