R/variantkey.R
InitVariantKey.Rd
Load the VariantKey support files. This should be the first function called in order to load the support files.
InitVariantKey(genoref_file = "", nrvk_file = "", rsvk_file = "", vkrs_file = "")
genoref_file | Name and path of the binary file containing the genome reference (fasta.bin). This file can be generated from a FASTA file using the resources/tools/fastabin.sh script. |
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nrvk_file | Name and path of the binary file containing the non-reversible-VariantKey mapping (nrvk.bin). This file can be generated from a normalized VCF file using the resources/tools/nrvk.sh script. |
rsvk_file | Name and path of the binary file containing the rsID to VariantKey mapping (rsvk.bin). This file can be generated using the resources/tools/rsvk.sh script. |
vkrs_file | Name and path of the binary file containing the VariantKey to rsID mapping (vkrs.bin). This file can be generated using the resources/tools/vkrs.sh script. |