R/variantkey.R
RegionKey.Rd
Returns a 64 bit regionkey based on CHROM, START POS (0-based), END POS and STRAND.
RegionKey(chrom, startpos, endpos, strand)
chrom | Chromosome. An identifier from the reference genome, no white-space or leading zeros permitted. |
---|---|
startpos | Start position (zero based). |
endpos | End position (startpos + region_length). |
strand | Strand direction (-1, 0, +1) |
sizechrom | Length of the chrom string, excluding the terminating null byte. |