VariantKey  5.4.1
Numerical Encoding for Human Genetic Variants
variantkey Directory Reference

Files

file  binsearch.h [code]
 Functions to search values in binary files made of constant-length items.
 
file  esid.h [code]
 Utility functions to encode strings.
 
file  genoref.h [code]
 Functions to retrieve genome reference sequences from a binary FASTA file.
 
file  hex.h [code]
 Utility functions to manipulate strings.
 
file  nrvk.h [code]
 Functions to retrieve REF and ALT values by VariantKey from binary data file.
 
file  regionkey.h [code]
 RegionKey main functions.
 
file  rsidvar.h [code]
 Functions to read VariantKey-rsID binary files.
 
file  set.h [code]
 Utility functions to sort and join uint64_t arrays.
 
file  variantkey.h [code]
 VariantKey main functions.